Phage Genomics Research Initiative

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The Phage Genomics Research Initiative is an exciting and innovative opportunity for freshmen biology majors entering UC San Diego to acquire hands-on research experience.

Participation in the program is by invitation only. Freshmen who are invited to apply will be contacted individually and given the website information for application.

Students accepted into the Phage Genomics Research program will learn how to approach research problems creatively. Research will focus on bacteriophage, rapidly evolving viruses that infect bacteria. Students will isolate new bacteriophage from the environment and sequence and characterize their genomes. A goal is for the results to be published in scientific journals with the students listed as co-authors.

Selected students who participate in the program for will earn course credit toward their Biology degree.

UC San Diego is one of only 12 universities nationwide previously selected by the Howard Hughes Medical Institute (HHMI) to offer this program to our students through HHMI's Science Education Alliance (SEA).

Faculty Instructors

Course Descriptions

There are several courses associated with the Phage Genomics Research Initiative. During fall and spring, the courses that will be offered are:

Fall
BILD 70 
(Genomics Research Initiative Lab I 4-units) Students will isolate bacterial viruses or other organisms from the environment and characterize them by methods including electron microscopy and nucleic acid analysis. The genomic DNA will be purified, and sent for sequencing.

Spring
BIMM 170 
(Genomics Research Initiative Laboratory II 4-units) Students will characterize the genomic sequence of the organisms isolated in BILD 70 and use molecular and computational tools to resolve ambiguities and close gaps. They will then annotate the DNA sequence to identify protein and RNA coding regions.

Related Links

UC San Diego Selected for Nationwide Science Education Program