Terrence J. Sejnowski
Professor of Biology, UCSD
Professor of Biology, Salk Institute
Investigator, Howard Hughes Medical Institute

e-mail: tsejnowski@ucsd.edu

The research in this laboratory ranges from experimental studies of the biophysical mechanisms underlying neural computation to large-scale cortical models of visual processing and sensorimotor coordination. The ultimate goal of this research is to provide linking principles from neural mechanisms to behavior. Computational neuroscience is a relatively recent approach to understanding how nervous systems represent, process, store, and act upon information that is latent in the environment or is
expressed genetically through developmental mechanisms. 

     The temporal processing of information in a neural system depends on both the intrinsic properties of the individual neurons composing the system and on the synaptic interactions between them. In the cerebral cortex, for example, neurons differ in their morphology, response properties, and connectivity with other neurons. Experimental and modeling techniques are used to explore the biophysical basis for the firing patterns observed in cortical neurons and the influence of neuromodulators. 

     Neocortical neurons display a wide variety of dendritic morphologies, ranging from compact arbors to highly elaborate branching patterns. Electrical recordings from these neurons have revealed a correspondingly diverse range of intrinsic firing patterns, including non-adapting, adapting, and bursting types. This heterogeneity of electrical responsivity has generally been attributed to variability in the types and densities of ionic channels, but compartmental models of reconstructed cortical neurons
display the entire spectrum of observed firing patterns by varying only the dendritic geometry. These results suggest a causal relationship for the observed correlations between dendritic structure and firing properties and emphasize the importance of active dendritic conductances in neuronal function. 

     When fluctuating current is injected into a cortical cell, the repetition of the irregular spike train is less than a millisecond. This is consistent with the hypothesis that cortical neurons could encode information in the timing of spikes. Neuromodulators such as acetylcholine, however, are known to reduce the adaptation of spike firing in cortical pyramidal neurons by blocking potassium currents responsible for the afterhyperpolarization, thereby altering the spike timing. In slice experiments, application of a cholinergic agonist did not change spike timing by more than that observed under control conditions. Additional spikes were generated because the neuron responded to smaller fluctuations that previously had not elicited a spike. 

     In addition to these cellular studies, advances have also been made in analyzing the extracellular field potentials generated by large populations of neurons. A new statistical technique has been used to probe the effects of attention and memory on the temporal sequence of neural activations that occur in response to briefly presented stimuli. 

     Most learning algorithms based on detecting correlations between presynaptic and postsynaptic activity are sensitive primarily to second-order statistics of the input. A new unsupervised learning algorithm was recently introduced by this laboratory that is sensitive to higher-order statistics. This new algorithm, called Independent Component Analysis (ICA), can be used for blindly separating a set of linearly-mixed signals to recover the original, statistically independent sources.

     Functional magnetic resonance imaging allows localization of human brain activity based on changes in blood flow on a time scale of seconds. Multichannel electric recordings from the scalp provide higher temporal resolution, but are not easily identified with sources of activity in the brain. ICA has been used to separate event-related brain responses into spatially stationary and temporally independent subcomponents. ICA has been applied to a variety of event-related potential recordings, including an auditory detection task, an attentional task, and a memory task. Previously identified response components were decomposed into subcomponents and many entirely new components were found that were differentially modulated by spatial and featural attention, novelty, and learning context. This new technique promises to complement the spatial resolution offered by functional
imaging techniques with high resolution timing information. 


     Laughlin, S. B., and Sejnowski, T. J., (2003). Communication in neuronal networks, Science 301: 1870-1874.

     Fellous, J.-M., Tiesinga, P. H.E., Thomas, P. J., and Sejnowski, T. J., (2004). Discovering spike patterns in neuronal responses, Journal of Neuroscience 24(12): 2989-3001.

     Eagleman, D. M., Jacobson, J. E., and Sejnowski, T. J., (2004). Perceived luminance depends on temporal context, Nature 428: 854-856.

     Coggan, J. S., Bartol, T. M., Esquenazi, E., Stiles, J. R., Lamont, S., Martone, M. E., Berg, D. K., Ellisman, M. H., and Sejnowski, T. J., (2005). Evidence for ectopic neurotransmission at a neuronal synapse, Science 39: 446-451.

     Frohlich, F., Bazhenov, M., Timofeev, I., Steriade, M., and Sejnowski, T. J., (2006). Slow state transitions of sustained neural oscillations by activity-dependent modulation of intrinsic excitability, Journal of Neuroscience 26: 6153 6162.
 

Dr. Sejnowski received his Ph.D. in physics from Princeton University. He was a postdoctoral fellow at Princeton University and the Harvard Medical School. He served on the faculty of Johns Hopkins University and was a Wiersma Visiting Professor of Neurobiology and a Sherman Fairchild Distinguished Scholar at Caltech