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Coming to Light: Researchers Document Surprise Mobility in Wild Bacteria

December 13, 2018

By Mario Aguilera

Microscopic photo of green cells

Cells of the cyanobacterium Synechococcus elongatus spotted at different positions of a line all grew toward a lateral light source (bottom). The flow of cells spreads out as cells move. Long-time incubation causes the populations to run into each other, giving the appearance of a Christmas tree. The “stars” appear when cells are inoculated along a circle on a plate covered with aluminum foil with a hole in the center. The cells move toward the center towards light, which leads to the star-like shaped colony.

Microscopic organisms known as cyanobacteria, often called “blue-green algae,” have been a staple in laboratories around the world for more than four decades for researchers studying everything from biofuels to new therapeutics.

University of California San Diego Biologist Susan Golden and her colleagues have used cyanobacteria as a key model for circadian rhythm studies, analyzing the organism’s 24-hour regular cycles that operate with the precision of a mechanical clock. The cyanobacterium Synechococcus elongatus is broadly used for such studies by Golden and others because of its ideal traits for laboratory studies, including the fact that it does not settle down on a surface or move…. or does it?

Now, Golden, postdoctoral researcher Yiling Yang and their coauthors have published a study in the Proceedings of the National Academy of Sciences with surprising results about a type of Synechococcus elongatus found in the wild. The researchers discovered that not only can these wild types move with tiny feelers called pili, but they do so in a strategic survival mode in accordance to the light they sense around them.

Microscopic photo of Synechococcus elongatus cells growing

When growing under lateral uni-directional illumination, wild Synechococcus elongatus cells move toward a light source by forming finger-like structures. Red autofluorescence indicates the population of the lab strain and the cells that exhibit yellow fluorescence are the motile wild strain (labelled with yellow fluorescent protein).

Thus, Yang, Golden and their colleagues concluded that the organism used in studies for so many years has undergone evolution in the laboratory that makes it highly valuable for research studies, a transformation described as “accidental domestication” (not unlike relatives of wild wolves evolving to our domesticated dogs).

“We’ve worked for decades with this organism and didn’t know that it moves,” said Golden, a distinguished professor and director of UC San Diego’s Center for Circadian Biology. “This appears to be a case of accidental evolutionary selection, with features that are useful in the lab being favored and other features being lost. If we look closely we can see that the lab strain moves a little bit, but doesn’t know where to go and doesn’t move very well. The movement of the wild strain on the other hand is quite spectacular.”

In the same way that humans respond to light levels—using the sun to acquire valuable vitamin D or protecting against damage from sunburns, for example— Synechococcus elongatus similarly appears to position itself in nature to acquire appropriate levels of light. Golden says the organism secretes a “biofilm” substance to attach to rocks or debris and probably moves around strategically in these layers to best orient to light.

“We’re learning more about how different kinds of organisms perceive light and how they can find the right place to be in their environment to live a good life,” said Golden. “We are learning more about regulation in the cell that might be useful for biotechnology purposes, such as using the light sensing mechanism as a way to turn processes on and off in the cell at will.”